Journal article
PreAcrs: a machine learning framework for identifying anti-CRISPR proteins
L Zhu, X Wang, F Li, J Song
BMC Bioinformatics | BMC | Published : 2022
Abstract
Background: Anti-CRISPR proteins are potent modulators that inhibit the CRISPR-Cas immunity system and have huge potential in gene editing and gene therapy as a genome-editing tool. Extensive studies have shown that anti-CRISPR proteins are essential for modifying endogenous genes, promoting the RNA-guided binding and cleavage of DNA or RNA substrates. In recent years, identifying and characterizing anti-CRISPR proteins has become a hot and significant research topic in bioinformatics. However, as most anti-CRISPR proteins fall short in sharing similarities to those currently known, traditional screening methods are time-consuming and inefficient. Machine learning methods could fill this gap..
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Grants
Awarded by Monash University
Funding Acknowledgements
This work was supported by grants from the Australian Research Council (ARC) (LP110200333 and DP120104460), National Health and Medical Research Council of Australia (NHMRC) (1092262, 490989), the National Institute of Allergy and Infectious Diseases of the National Institutes of Health (R01 AI111965), and a Major Inter-Disciplinary Research (IDR) Grant Awarded by Monash University. C.L. is currently supported by an NHMRC CJ Martin Early Career Research Fellowship (1143366).